Uses of Interface
elki.database.datastore.WritableIntegerDataStore

Packages that use WritableIntegerDataStore

Package	Description
elki.clustering.correlation	Correlation clustering algorithms.
elki.clustering.dbscan	DBSCAN and its generalizations.
elki.clustering.kmeans	K-means clustering and variations.
elki.clustering.kmeans.parallel	Parallelized implementations of k-means.
elki.clustering.kmedoids	K-medoids clustering (PAM).
elki.clustering.kmedoids.initialization
elki.clustering.optics	OPTICS family of clustering algorithms.
elki.clustering.silhouette	Silhouette clustering algorithms.
elki.clustering.subspace	Axis-parallel subspace clustering algorithms.
elki.clustering.uncertain	Clustering algorithms for uncertain data.
elki.database.datastore	General data store layer API (along the lines of Map<DBID, T> - use everywhere!)
elki.database.datastore.memory	Memory data store implementation for ELKI.
elki.outlier	Outlier detection algorithms.
elki.parallel.processor	Processor API of ELKI, and some essential shared processors.
elki.utilities.datastructures.unionfind	Union-find data structures.

Uses of WritableIntegerDataStore in elki.clustering.correlation

Fields in elki.clustering.correlation declared as WritableIntegerDataStore

Modifier and Type	Field	Description
private WritableIntegerDataStore	HiCO.Instance.correlationValue	Correlation value.
private WritableIntegerDataStore	HiCO.Instance.tmpCorrelation	Temporary storage of correlation values.

Uses of WritableIntegerDataStore in elki.clustering.dbscan

Fields in elki.clustering.dbscan declared as WritableIntegerDataStore

Modifier and Type	Field	Description
private WritableIntegerDataStore	GriDBSCAN.Instance.temporary	Temporary assignments of a single run.

Methods in elki.clustering.dbscan with parameters of type WritableIntegerDataStore

Modifier and Type	Method	Description
protected int	GeneralizedDBSCAN.Instance.expandCluster(DBIDRef seed, int clusterid, WritableIntegerDataStore clusterids, T neighbors, ArrayModifiableDBIDs activeSet, FiniteProgress progress)	Set-based expand cluster implementation.
protected int	GriDBSCAN.Instance.expandCluster(DBIDRef seed, int clusterid, WritableIntegerDataStore clusterids, ModifiableDoubleDBIDList neighbors, ArrayModifiableDBIDs activeSet, RangeSearcher<DBIDRef> rq, FiniteProgress pprog)	Set-based expand cluster implementation.
protected int	LSDBC.expandCluster(int clusterid, WritableIntegerDataStore clusterids, KNNSearcher<DBIDRef> knnq, DBIDs neighbors, double maxkdist, FiniteProgress progress)	Set-based expand cluster implementation.
protected void	GriDBSCAN.Instance.mergeClusterInformation(ModifiableDBIDs cellids, WritableIntegerDataStore temporary, WritableDataStore<Assignment> clusterids)	Merge cluster information.
protected int	GeneralizedDBSCAN.Instance.processCorePoint(DBIDRef seed, T newneighbors, int clusterid, WritableIntegerDataStore clusterids, ArrayModifiableDBIDs activeSet)	Process a single core point.
protected int	GriDBSCAN.Instance.processCorePoint(DBIDRef seed, DoubleDBIDList newneighbors, int clusterid, WritableIntegerDataStore clusterids, ArrayModifiableDBIDs activeSet)	Process a single core point.

Uses of WritableIntegerDataStore in elki.clustering.kmeans

Fields in elki.clustering.kmeans declared as WritableIntegerDataStore

Modifier and Type	Field	Description
protected WritableIntegerDataStore	AbstractKMeans.Instance.assignment	A mapping of elements to cluster ids.
(package private) WritableIntegerDataStore	AnnulusKMeans.Instance.second	Second nearest cluster.
(package private) WritableIntegerDataStore	ShallotKMeans.Instance.second	Second nearest cluster.
(package private) WritableIntegerDataStore	HartiganWongKMeans.Instance.secondary	Second nearest cluster.

Uses of WritableIntegerDataStore in elki.clustering.kmeans.parallel

Fields in elki.clustering.kmeans.parallel declared as WritableIntegerDataStore

Modifier and Type	Field	Description
(package private) WritableIntegerDataStore	KMeansProcessor.assignment	Assignment storage.
private WritableIntegerDataStore	KMeansProcessor.Instance.assignment	Cluster assignment storage.

Constructors in elki.clustering.kmeans.parallel with parameters of type WritableIntegerDataStore

Constructor	Description
Instance(Relation<V> relation, NumberVectorDistance<? super V> distance, WritableIntegerDataStore assignment, double[][] means)	Constructor.
KMeansProcessor(Relation<V> relation, NumberVectorDistance<? super V> distance, WritableIntegerDataStore assignment, double[] varsum)	Constructor.

Uses of WritableIntegerDataStore in elki.clustering.kmedoids

Fields in elki.clustering.kmedoids declared as WritableIntegerDataStore

Modifier and Type	Field	Description
(package private) WritableIntegerDataStore	CLARANS.Assignment.assignment	Cluster mapping.
(package private) WritableIntegerDataStore	PAM.Instance.assignment	Cluster mapping.
(package private) WritableIntegerDataStore	SingleAssignmentKMedoids.Instance.assignment	Cluster mapping.
(package private) WritableIntegerDataStore	CLARANS.Assignment.secondid	Medoid id of the second closest.

Methods in elki.clustering.kmedoids with parameters of type WritableIntegerDataStore

Modifier and Type	Method	Description
protected static double	CLARA.assignRemainingToNearestCluster(ArrayDBIDs means, DBIDs ids, DBIDs rids, WritableIntegerDataStore assignment, DistanceQuery<?> distQ)	Returns a list of clusters.
protected static Clustering<MedoidModel>	PAM.wrapResult(DBIDs ids, WritableIntegerDataStore assignment, ArrayModifiableDBIDs medoids, java.lang.String name)	Wrap the clustering result.

Constructors in elki.clustering.kmedoids with parameters of type WritableIntegerDataStore

Constructor	Description
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment, double fasttol)	Constructor.
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.

Uses of WritableIntegerDataStore in elki.clustering.kmedoids.initialization

Methods in elki.clustering.kmedoids.initialization with parameters of type WritableIntegerDataStore

Modifier and Type	Method	Description
static double	AlternateRefinement.assignToNearestCluster(DBIDArrayIter miter, DBIDs ids, DistanceQuery<?> distQ, WritableIntegerDataStore assignment, double[] cost)	Compute the initial cluster assignment.

Uses of WritableIntegerDataStore in elki.clustering.optics

Fields in elki.clustering.optics declared as WritableIntegerDataStore

Modifier and Type	Field	Description
protected WritableIntegerDataStore	CorrelationClusterOrder.correlationValue	The correlation dimension.

Constructors in elki.clustering.optics with parameters of type WritableIntegerDataStore

Constructor	Description
CorrelationClusterOrder(ArrayModifiableDBIDs ids, WritableDoubleDataStore reachability, WritableDBIDDataStore predecessor, WritableIntegerDataStore corrdim)	Constructor.

Uses of WritableIntegerDataStore in elki.clustering.silhouette

Fields in elki.clustering.silhouette declared as WritableIntegerDataStore

Modifier and Type	Field	Description
protected WritableIntegerDataStore	FastMSC.Instance2.assignment	Output cluster mapping.
(package private) WritableIntegerDataStore	PAMSIL.Instance.assignment	Cluster mapping.
protected WritableIntegerDataStore	FastMSC.Instance.output	Output cluster mapping.
(package private) WritableIntegerDataStore	PAMSIL.Instance.scratch	Scratch cluster mapping.

Methods in elki.clustering.silhouette with parameters of type WritableIntegerDataStore

Modifier and Type	Method	Description
protected void	PAMSIL.Instance.reassignToNearestCluster(IntegerDataStore prev, WritableIntegerDataStore assignment, ArrayDBIDs medoids, int pi, DBIDRef h)	Assign each object to the nearest cluster when replacing one medoid.

Constructors in elki.clustering.silhouette with parameters of type WritableIntegerDataStore

Constructor	Description
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.
Instance(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.
Instance2(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.
Instance2(DistanceQuery<?> distQ, DBIDs ids, WritableIntegerDataStore assignment)	Constructor.

Uses of WritableIntegerDataStore in elki.clustering.subspace

Fields in elki.clustering.subspace declared as WritableIntegerDataStore

Modifier and Type	Field	Description
private WritableIntegerDataStore	DiSH.Instance.correlationValue	Correlation value.
private WritableIntegerDataStore	HiSC.Instance.correlationValue	Correlation dimensionality.
private WritableIntegerDataStore	DiSH.Instance.tmpCorrelation	Temporary storage of correlation values.

Constructors in elki.clustering.subspace with parameters of type WritableIntegerDataStore

Constructor	Description
DiSHClusterOrder(ArrayModifiableDBIDs ids, WritableDoubleDataStore reachability, WritableDBIDDataStore predecessor, WritableIntegerDataStore corrdim, WritableDataStore<long[]> commonPreferenceVectors)	Constructor.

Uses of WritableIntegerDataStore in elki.clustering.uncertain

Methods in elki.clustering.uncertain with parameters of type WritableIntegerDataStore

Modifier and Type	Method	Description
protected boolean	UKMeans.assignToNearestCluster(Relation<DiscreteUncertainObject> relation, java.util.List<double[]> means, java.util.List<? extends ModifiableDBIDs> clusters, WritableIntegerDataStore assignment, double[] varsum)	Returns a list of clusters.
protected boolean	UKMeans.updateAssignment(DBIDIter iditer, java.util.List<? extends ModifiableDBIDs> clusters, WritableIntegerDataStore assignment, int newA)	Update the cluster assignment.

Uses of WritableIntegerDataStore in elki.database.datastore

Methods in elki.database.datastore that return WritableIntegerDataStore

Modifier and Type	Method	Description
WritableIntegerDataStore	DataStoreFactory.makeIntegerStorage(DBIDs ids, int hints)	Make a new storage, to associate the given ids with an object of class dataclass.
WritableIntegerDataStore	DataStoreFactory.makeIntegerStorage(DBIDs ids, int hints, int def)	Make a new storage, to associate the given ids with an object of class dataclass.
static WritableIntegerDataStore	DataStoreUtil.makeIntegerStorage(DBIDs ids, int hints)	Make a new storage, to associate the given ids with an object of class dataclass.
static WritableIntegerDataStore	DataStoreUtil.makeIntegerStorage(DBIDs ids, int hints, int def)	Make a new storage, to associate the given ids with an object of class dataclass.

Uses of WritableIntegerDataStore in elki.database.datastore.memory

Classes in elki.database.datastore.memory that implement WritableIntegerDataStore

Modifier and Type	Class	Description
class	ArrayIntegerStore	A class to answer representation queries using the stored Array.
class	MapIntegerDBIDIntegerStore	Writable data store for double values.

Methods in elki.database.datastore.memory that return WritableIntegerDataStore

Modifier and Type	Method	Description
WritableIntegerDataStore	MemoryDataStoreFactory.makeIntegerStorage(DBIDs ids, int hints)
WritableIntegerDataStore	MemoryDataStoreFactory.makeIntegerStorage(DBIDs ids, int hints, int def)

Uses of WritableIntegerDataStore in elki.outlier

Methods in elki.outlier with parameters of type WritableIntegerDataStore

Modifier and Type	Method	Description
private int	DWOF.updateSizes(DBIDs ids, WritableDataStore<ModifiableDBIDs> labels, WritableIntegerDataStore newSizes)	This method updates each object's cluster size after the clustering step.

Uses of WritableIntegerDataStore in elki.parallel.processor

Fields in elki.parallel.processor declared as WritableIntegerDataStore

Modifier and Type	Field	Description
(package private) WritableIntegerDataStore	WriteIntegerDataStoreProcessor.store	Store to write to

Constructors in elki.parallel.processor with parameters of type WritableIntegerDataStore

Constructor	Description
WriteIntegerDataStoreProcessor(WritableIntegerDataStore store)	Constructor.

Uses of WritableIntegerDataStore in elki.utilities.datastructures.unionfind

Fields in elki.utilities.datastructures.unionfind declared as WritableIntegerDataStore

Modifier and Type	Field	Description
private WritableIntegerDataStore	WeightedQuickUnionStaticDBIDs.index	Index, to map DBID to offset.