Package elki.distance.probabilistic
Class TriangularDistance
- java.lang.Object
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- elki.distance.AbstractNumberVectorDistance
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- elki.distance.probabilistic.TriangularDiscriminationDistance
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- elki.distance.probabilistic.TriangularDistance
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- All Implemented Interfaces:
Distance<NumberVector>,NumberVectorDistance<NumberVector>,PrimitiveDistance<NumberVector>,SpatialPrimitiveDistance<NumberVector>
@Reference(authors="R. Connor, F. A. Cardillo, L. Vadicamo, F. Rabitti", title="Hilbert Exclusion: Improved Metric Search through Finite Isometric Embeddings", booktitle="arXiv preprint arXiv:1604.08640", url="http://arxiv.org/abs/1604.08640", bibkey="DBLP:journals/corr/ConnorCVR16") public class TriangularDistance extends TriangularDiscriminationDistance
Triangular Distance has relatively tight upper and lower bounds to the (square root of the) Jensen-Shannon divergence, but is much less expensive.\[\text{Triangular-Distance}(\vec{x},\vec{y}):=\sqrt{ \sum\nolimits_i \tfrac{|x_i-y_i|^2}{x_i+y_i}}\]
This distance function is meant for distribution vectors that sum to 1, and does not work on negative values.
This differs from
TriangularDistancesimply by the square root, which makes it a proper metric and a good approximation for the much more expensiveSqrtJensenShannonDivergenceDistance.Reference:
R. Connor, F. A. Cardillo, L. Vadicamo, F. Rabitti
Hilbert Exclusion: Improved Metric Search through Finite Isometric Embeddings
arXiv preprint arXiv:1604.08640TODO: support sparse vectors, varying length
- Since:
- 0.7.5
- Author:
- Erich Schubert
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Nested Class Summary
Nested Classes Modifier and Type Class Description static classTriangularDistance.ParParameterization class, using the static instance.
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Field Summary
Fields Modifier and Type Field Description static TriangularDistanceSTATICStatic instance.
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Constructor Summary
Constructors Modifier Constructor Description privateTriangularDistance()Deprecated.
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description doubledistance(NumberVector v1, NumberVector v2)Computes the distance between two given DatabaseObjects according to this distance function.booleanequals(java.lang.Object obj)inthashCode()booleanisMetric()Is this distance function metric (satisfy the triangle inequality)booleanisSquared()Squared distances, that would become metric after square root.doubleminDist(SpatialComparable mbr1, SpatialComparable mbr2)Computes the distance between the two given MBRs according to this distance function.java.lang.StringtoString()-
Methods inherited from class elki.distance.AbstractNumberVectorDistance
dimensionality, dimensionality, dimensionality, dimensionality, dimensionality, dimensionality, dimensionality, dimensionality, getInputTypeRestriction
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Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait
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Methods inherited from interface elki.distance.Distance
isSymmetric
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Methods inherited from interface elki.distance.PrimitiveDistance
getInputTypeRestriction
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Methods inherited from interface elki.distance.SpatialPrimitiveDistance
instantiate
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Field Detail
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STATIC
public static final TriangularDistance STATIC
Static instance. Use this!
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Constructor Detail
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TriangularDistance
@Deprecated private TriangularDistance()
Deprecated.Deprecated constructor: use the static instanceSTATICinstead.
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Method Detail
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distance
public double distance(NumberVector v1, NumberVector v2)
Description copied from interface:PrimitiveDistanceComputes the distance between two given DatabaseObjects according to this distance function.- Specified by:
distancein interfaceNumberVectorDistance<NumberVector>- Specified by:
distancein interfacePrimitiveDistance<NumberVector>- Overrides:
distancein classTriangularDiscriminationDistance- Parameters:
v1- first DatabaseObjectv2- second DatabaseObject- Returns:
- the distance between two given DatabaseObjects according to this distance function
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minDist
public double minDist(SpatialComparable mbr1, SpatialComparable mbr2)
Description copied from interface:SpatialPrimitiveDistanceComputes the distance between the two given MBRs according to this distance function.- Specified by:
minDistin interfaceSpatialPrimitiveDistance<NumberVector>- Overrides:
minDistin classTriangularDiscriminationDistance- Parameters:
mbr1- the first MBR objectmbr2- the second MBR object- Returns:
- the distance between the two given MBRs according to this distance function
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isSquared
public boolean isSquared()
Description copied from interface:DistanceSquared distances, that would become metric after square root.E.g. squared Euclidean.
- Specified by:
isSquaredin interfaceDistance<NumberVector>- Overrides:
isSquaredin classTriangularDiscriminationDistance- Returns:
truewhen squared.
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isMetric
public boolean isMetric()
Description copied from interface:DistanceIs this distance function metric (satisfy the triangle inequality)- Returns:
truewhen metric.
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toString
public java.lang.String toString()
- Overrides:
toStringin classTriangularDiscriminationDistance
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equals
public boolean equals(java.lang.Object obj)
- Overrides:
equalsin classTriangularDiscriminationDistance
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hashCode
public int hashCode()
- Overrides:
hashCodein classTriangularDiscriminationDistance
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