Uses of Interface
elki.database.ids.DBIDIter

Packages that use DBIDIter

Package	Description
elki.algorithm.statistics	Statistical analysis algorithms.
elki.clustering.dbscan.predicates	Neighbor and core predicated for Generalized DBSCAN.
elki.clustering.hierarchical	Hierarchical agglomerative clustering (HAC).
elki.clustering.kmeans	K-means clustering and variations.
elki.clustering.uncertain	Clustering algorithms for uncertain data.
elki.database.ids	Database object identification and ID group handling API.
elki.database.ids.integer	Integer-based DBID implementation -- do not use directly - always use DBIDUtil.
elki.database.query	Database queries - computing distances, neighbors, similarities - API and general documentation.
elki.database.query.distance	Prepared queries for distances.
elki.database.relation	Relations, materialized and virtual (views).
elki.evaluation.scores.adapter	Adapter classes for ranking and scoring measures.
elki.evaluation.similaritymatrix	Render a distance matrix to visualize a clustering-distance-combination.
elki.index.distancematrix	Precomputed distance matrix.
elki.index.tree.metrical.covertree	Cover-tree variations.
elki.index.tree.metrical.vptree
elki.index.tree.spatial.kd	K-d-tree and variants.
elki.index.tree.spatial.rstarvariants.query	Queries on the R-Tree family of indexes: kNN and range queries.
elki.outlier.clustering	Clustering based outlier detection.
elki.outlier.distance	Distance-based outlier detection algorithms, such as DBOutlier and kNN.
elki.outlier.intrinsic	Outlier detection algorithms based on intrinsic dimensionality.
elki.outlier.lof	LOF family of outlier detection algorithms.
elki.visualization.style	Style management for ELKI visualizations.
elki.visualization.visualizers.pairsegments	Visualizers for inspecting cluster differences using pair counting segments.

Uses of DBIDIter in elki.algorithm.statistics

Methods in elki.algorithm.statistics with parameters of type DBIDIter

Modifier and Type	Method	Description
private void	EvaluateRetrievalPerformance.computeDistances(ModifiableDoubleDBIDList nlist, DBIDIter query, DistanceQuery<O> distQuery, Relation<O> relation)	Compute the distances to the neighbor objects.

Uses of DBIDIter in elki.clustering.dbscan.predicates

Methods in elki.clustering.dbscan.predicates that return DBIDIter

Modifier and Type	Method	Description
DBIDIter	COPACNeighborPredicate.COPACModel.iter()
DBIDIter	COPACNeighborPredicate.Instance.iterDBIDs(COPACNeighborPredicate.COPACModel neighbors)
DBIDIter	EpsilonNeighborPredicate.Instance.iterDBIDs(DoubleDBIDList neighbors)
DBIDIter	ERiCNeighborPredicate.Instance.iterDBIDs(DBIDs neighbors)
DBIDIter	FourCNeighborPredicate.Instance.iterDBIDs(PreDeConNeighborPredicate.PreDeConModel neighbors)
DBIDIter	NeighborPredicate.Instance.iterDBIDs(T neighbors)	Add the neighbors to a DBID set
DBIDIter	PreDeConNeighborPredicate.Instance.iterDBIDs(PreDeConNeighborPredicate.PreDeConModel neighbors)
DBIDIter	SimilarityNeighborPredicate.Instance.iterDBIDs(DoubleDBIDList neighbors)

Uses of DBIDIter in elki.clustering.hierarchical

Methods in elki.clustering.hierarchical with parameters of type DBIDIter

Modifier and Type	Method	Description
private static double	HACAM.Instance.distanceSum(DistanceQuery<?> dq, DBIDIter i, DBIDs cy, double distsum, double minDistSum)	Find the maximum distance of one object to a set.
private static double	MiniMax.Instance.findMax(DistanceQuery<?> dq, DBIDIter i, DBIDs cy, double maxDist, double minMaxDist)	Find the maximum distance of one object to a set.

Uses of DBIDIter in elki.clustering.kmeans

Methods in elki.clustering.kmeans with parameters of type DBIDIter

Modifier and Type	Method	Description
private double	HartiganWongKMeans.Instance.cacheR1(DBIDIter it, NumberVector vec, int l1)	Compute and cache the R1 value.
private boolean	MacQueenKMeans.Instance.updateMeanAndAssignment(int minIndex, NumberVector fv, DBIDIter iditer)	Try to update the cluster assignment.

Uses of DBIDIter in elki.clustering.uncertain

Methods in elki.clustering.uncertain that return DBIDIter

Modifier and Type	Method	Description
DBIDIter	FDBSCANNeighborPredicate.Instance.iterDBIDs(DBIDs neighbors)

Methods in elki.clustering.uncertain with parameters of type DBIDIter

Modifier and Type	Method	Description
protected boolean	UKMeans.updateAssignment(DBIDIter iditer, java.util.List<? extends ModifiableDBIDs> clusters, WritableIntegerDataStore assignment, int newA)	Update the cluster assignment.

Uses of DBIDIter in elki.database.ids

Subinterfaces of DBIDIter in elki.database.ids

Modifier and Type	Interface	Description
interface	DBIDArrayIter	Array iterators that can also go backwards and seek.
interface	DBIDArrayMIter	Modifiable array iterator.
interface	DBIDMIter	Modifiable DBID iterator.
interface	DoubleDBIDIter	Iterator over Double+DBID pairs results.
interface	DoubleDBIDListIter	Iterator over Double+DBID pairs results.
interface	DoubleDBIDListMIter	Modifiable DBIDList iterator.

Classes in elki.database.ids that implement DBIDIter

Modifier and Type	Class	Description
protected static class	EmptyDBIDs.EmptyDBIDIterator	Iterator for empty DBIDs-

Methods in elki.database.ids that return DBIDIter

Modifier and Type	Method	Description
DBIDIter	DBIDIter.advance()
DBIDIter	DBIDs.iter()	Get a DBID iterator (a more efficient API).

Uses of DBIDIter in elki.database.ids.integer

Subinterfaces of DBIDIter in elki.database.ids.integer

Modifier and Type	Interface	Description
interface	DoubleIntegerDBIDListIter	Combination interface of the DoubleDBIDListIter with IntegerDBIDIter.
(package private) interface	DoubleIntegerDBIDListMIter	Combination interface for modifiable iterators.
(package private) interface	IntegerDBIDArrayIter	Modifiable integer array iterator.
(package private) interface	IntegerDBIDArrayMIter	Modifiable integer array iterator.
(package private) interface	IntegerDBIDIter	Iterator for integer DBIDs.
(package private) interface	IntegerDBIDMIter	Modifiable iterator interface for integer DBIDs.

Classes in elki.database.ids.integer that implement DBIDIter

Modifier and Type	Class	Description
private class	ArrayModifiableIntegerDBIDs.Itr	Iterator class.
private class	ArrayModifiableIntegerDBIDs.Slice.SliceItr	Iterator class.
protected class	ArrayStaticIntegerDBIDs.Itr	DBID iterator in ELKI/C style.
private class	ArrayStaticIntegerDBIDs.Slice.SliceItr	Iterator class.
private class	DoubleIntegerDBIDArrayList.Itr	List iterator.
protected class	DoubleIntegerDBIDHeap.UnorderedIter	Iterate over all objects in the heap, not ordered.
private class	DoubleIntegerDBIDKNNHeap.UnorderedIter	Iterate over all objects in the heap, not ordered.
private class	DoubleIntegerDBIDSubList.Itr	Iterator for the sublist.
protected static class	FastutilIntOpenHashSetModifiableDBIDs.Itr	Iterator over Fastutil hashs.
protected class	IntegerDBID.Itr	Pseudo iterator for DBIDs interface.
private class	IntegerDBIDKNNSubList.Itr	Iterator for the sublist.
private static class	IntegerDBIDPair.Itr	Iterator.
private class	IntegerDBIDPair.Slice.SliceItr	Iterator class.
private static class	IntegerDBIDRange.Itr	Iterator in ELKI/C++ style.
protected class	IntegerDBIDVar.Itr	Pseudo iterator for DBIDs interface.
private static class	UnmodifiableIntegerArrayDBIDs.Itr	Make an existing DBIDMIter unmodifiable.
(package private) static class	UnmodifiableIntegerDBIDs.UnmodifiableDBIDIter	Make an existing DBIDMIter unmodifiable.

Methods in elki.database.ids.integer that return DBIDIter

Modifier and Type	Method	Description
DBIDIter	UnmodifiableIntegerDBIDs.UnmodifiableDBIDIter.advance()

Uses of DBIDIter in elki.database.query

Subinterfaces of DBIDIter in elki.database.query

Modifier and Type	Interface	Description
interface	PrioritySearcher<O>	Distance priority-based searcher.

Classes in elki.database.query that implement DBIDIter

Modifier and Type	Class	Description
class	ExactPrioritySearcher<O>	Priority searcher that refines all objects to their exact distances, using another priority searcher inside to provide candidates.
class	WrappedPrioritySearchDBIDByLookup<O>	Find nearest neighbors by querying with the original object.
static class	WrappedPrioritySearchDBIDByLookup.Linear<O>	Linear scan searcher.

Uses of DBIDIter in elki.database.query.distance

Classes in elki.database.query.distance that implement DBIDIter

Modifier and Type	Class	Description
class	LinearScanEuclideanPrioritySearcher<Q,O extends NumberVector>	Default linear scan search class, for Euclidean distance.
static class	LinearScanEuclideanPrioritySearcher.ByDBID<O extends NumberVector>	Search by DBID.
static class	LinearScanEuclideanPrioritySearcher.ByObject<O extends NumberVector>	Search by Object.
class	LinearScanPrioritySearcher<Q,O>	Default linear scan search class.
static class	LinearScanPrioritySearcher.ByDBID<O>	Search by DBID.
static class	LinearScanPrioritySearcher.ByObject<O>	Search by Object.

Fields in elki.database.query.distance declared as DBIDIter

Modifier and Type	Field	Description
private DBIDIter	LinearScanEuclideanPrioritySearcher.iter	Iterator.
protected DBIDIter	LinearScanPrioritySearcher.iter	Iterator.

Uses of DBIDIter in elki.database.relation

Fields in elki.database.relation declared as DBIDIter

Modifier and Type	Field	Description
(package private) DBIDIter	RelationUtil.RelationObjectIterator.iter	The real iterator.

Methods in elki.database.relation that return DBIDIter

Modifier and Type	Method	Description
DBIDIter	ConvertToStringView.iterDBIDs()
DBIDIter	DBIDView.iterDBIDs()
DBIDIter	MaterializedDoubleRelation.iterDBIDs()
DBIDIter	MaterializedRelation.iterDBIDs()
DBIDIter	ProjectedView.iterDBIDs()
DBIDIter	ProxyView.iterDBIDs()
DBIDIter	Relation.iterDBIDs()	Get an iterator access to the DBIDs.

Constructors in elki.database.relation with parameters of type DBIDIter

Constructor	Description
RelationObjectIterator(DBIDIter iter, Relation<? extends O> database)	Full Constructor.

Uses of DBIDIter in elki.evaluation.scores.adapter

Fields in elki.evaluation.scores.adapter declared as DBIDIter

Modifier and Type	Field	Description
private DBIDIter	OutlierScoreAdapter.iter	Original iterator.
private DBIDIter	SimpleAdapter.iter	Original Iterator

Constructors in elki.evaluation.scores.adapter with parameters of type DBIDIter

Constructor	Description
SimpleAdapter(DBIDs set, DBIDIter iter, int size)	Constructor

Uses of DBIDIter in elki.evaluation.similaritymatrix

Methods in elki.evaluation.similaritymatrix with parameters of type DBIDIter

Modifier and Type	Method	Description
private ComputeSimilarityMatrixImage.SimilarityMatrix	ComputeSimilarityMatrixImage.computeSimilarityMatrixImage(Relation<O> relation, DBIDIter iter)	Compute the actual similarity image.

Uses of DBIDIter in elki.index.distancematrix

Classes in elki.index.distancematrix that implement DBIDIter

Modifier and Type	Class	Description
class	PrecomputedDistanceMatrix.PrecomputedDistancePrioritySearcher	Range query using the distance matrix.

Uses of DBIDIter in elki.index.tree.metrical.covertree

Classes in elki.index.tree.metrical.covertree that implement DBIDIter

Modifier and Type	Class	Description
class	CoverTree.CoverTreePriorityDBIDSearcher	Priority query class.
class	CoverTree.CoverTreePriorityObjectSearcher	Priority query class.
class	CoverTree.CoverTreePrioritySearcher<Q>	Priority query class.
class	SimplifiedCoverTree.CoverTreePriorityDBIDSearcher	Priority query class.
class	SimplifiedCoverTree.CoverTreePriorityObjectSearcher	Priority query class.
class	SimplifiedCoverTree.CoverTreePrioritySearcher<Q>	Priority query class.

Uses of DBIDIter in elki.index.tree.metrical.vptree

Classes in elki.index.tree.metrical.vptree that implement DBIDIter

Modifier and Type	Class	Description
class	GNAT.GNATPriorityDBIDSearcher	Range search for the VP-tree.
class	GNAT.GNATPriorityObjectSearcher	Range search for the VP-tree.
class	GNAT.GNATPrioritySearcher<T>	priority search query for mvp-tree
class	VPTree.VPTreePriorityDBIDSearcher	Range search for the VP-tree.
class	VPTree.VPTreePriorityObjectSearcher	Range search for the VP-tree.
class	VPTree.VPTreePrioritySearcher<Q>	Priority search for the VP-Tree.

Uses of DBIDIter in elki.index.tree.spatial.kd

Classes in elki.index.tree.spatial.kd that implement DBIDIter

Modifier and Type	Class	Description
class	MemoryKDTree.KDTreePrioritySearcher	Priority search for the k-d-tree.
class	MinimalisticMemoryKDTree.KDTreePrioritySearcher	Priority search for the k-d-tree.
class	SmallMemoryKDTree.KDTreePrioritySearcher	Priority search for the k-d-tree.

Methods in elki.index.tree.spatial.kd that return DBIDIter

Modifier and Type	Method	Description
DBIDIter	MemoryKDTree.CountingRelation.iterDBIDs()

Uses of DBIDIter in elki.index.tree.spatial.rstarvariants.query

Classes in elki.index.tree.spatial.rstarvariants.query that implement DBIDIter

Modifier and Type	Class	Description
class	EuclideanRStarTreeDistancePrioritySearcher<O extends SpatialComparable>	Instance of priority search for a particular spatial index.
class	RStarTreeDistancePrioritySearcher<O extends SpatialComparable>	Instance of priority search for a particular spatial index.

Uses of DBIDIter in elki.outlier.clustering

Methods in elki.outlier.clustering with parameters of type DBIDIter

Modifier and Type	Method	Description
private void	CBLOF.storeCBLOFScore(WritableDoubleDataStore cblofs, DoubleMinMax cblofMinMax, double cblof, DBIDIter iter)

Uses of DBIDIter in elki.outlier.distance

Methods in elki.outlier.distance with parameters of type DBIDIter

Modifier and Type	Method	Description
static void	SOS.nominateNeighbors(DBIDIter ignore, DBIDArrayIter di, double[] p, double norm, WritableDoubleDataStore scores)	Vote for neighbors not being outliers.
static double	SOS.sumOfProbabilities(DBIDIter ignore, DBIDArrayIter di, double[] p)	Compute the sum of probabilities, stop at first 0, ignore query object.

Uses of DBIDIter in elki.outlier.intrinsic

Methods in elki.outlier.intrinsic with parameters of type DBIDIter

Modifier and Type	Method	Description
static void	ISOS.nominateNeighbors(DBIDIter ignore, DBIDArrayIter di, double[] p, double norm, WritableDoubleDataStore scores)	Vote for neighbors not being outliers.

Uses of DBIDIter in elki.outlier.lof

Methods in elki.outlier.lof with parameters of type DBIDIter

Modifier and Type	Method	Description
protected double	LOF.computeLRD(KNNSearcher<DBIDRef> knnq, DBIDIter curr)	Compute a single local reachability distance.

Uses of DBIDIter in elki.visualization.style

Methods in elki.visualization.style that return DBIDIter

Modifier and Type	Method	Description
DBIDIter	ClassStylingPolicy.iterateClass(int cnum)	Iterate over all objects from a given class.
DBIDIter	ClusterStylingPolicy.iterateClass(int cnum)

Uses of DBIDIter in elki.visualization.visualizers.pairsegments

Methods in elki.visualization.visualizers.pairsegments that return DBIDIter

Modifier and Type	Method	Description
DBIDIter	SegmentsStylingPolicy.iterateClass(int cnum)