Uses of Interface
elki.database.ids.DoubleDBIDList

Packages that use DoubleDBIDList

Package	Description
elki.application.benchmark	Benchmarking pseudo algorithms.
elki.clustering.dbscan	DBSCAN and its generalizations.
elki.clustering.dbscan.predicates	Neighbor and core predicated for Generalized DBSCAN.
elki.data.type	Data type information, also used for type restrictions.
elki.database.ids	Database object identification and ID group handling API.
elki.database.ids.integer	Integer-based DBID implementation -- do not use directly - always use DBIDUtil.
elki.database.query.range	Prepared queries for ε-range queries, that return all objects within the radius ε.
elki.database.query.rknn	Prepared queries for reverse k nearest neighbor (rkNN) queries.
elki.evaluation.clustering	Evaluation of clustering results.
elki.evaluation.scores	Evaluation of rankings and scorings.
elki.index.preprocessed.knn	Indexes providing KNN and rKNN data.
elki.index.projected	Projected indexes for data.
elki.index.tree.metrical.covertree	Cover-tree variations.
elki.index.tree.metrical.mtreevariants.mktrees	Metrical index structures based on the concepts of the M-Tree supporting processing of reverse k nearest neighbor queries by using the k-nn distances of the entries.
elki.index.tree.metrical.mtreevariants.mktrees.mkapp	MkAppTree.
elki.index.tree.metrical.mtreevariants.mktrees.mkcop	MkCoPTree.
elki.index.tree.metrical.mtreevariants.mktrees.mkmax	MkMaxTree.
elki.index.tree.metrical.mtreevariants.mktrees.mktab	MkTabTree.
elki.index.tree.metrical.mtreevariants.query	Classes for performing queries (knn, range, ...) on metrical trees.
elki.index.tree.spatial.rstarvariants.rdknn	RdKNNTree.
elki.math.linearalgebra.pca	Principal Component Analysis (PCA) and eigenvector processing.
elki.outlier.distance	Distance-based outlier detection algorithms, such as DBOutlier and kNN.
elki.outlier.subspace	Subspace outlier detection methods.
elki.visualization.projections	Visualization projections.
elki.visualization.projector	Projectors are responsible for finding appropriate projections for data relations.
elki.visualization.silhouette	Code for drawing silhouette plots.

Uses of DoubleDBIDList in elki.application.benchmark

Methods in elki.application.benchmark with parameters of type DoubleDBIDList

Modifier and Type	Method	Description
protected int	RangeQueryBenchmark.processResult(DoubleDBIDList rres, MeanVariance mv)	Method to test a result.

Uses of DoubleDBIDList in elki.clustering.dbscan

Methods in elki.clustering.dbscan with parameters of type DoubleDBIDList

Modifier and Type	Method	Description
protected int	GriDBSCAN.Instance.processCorePoint(DBIDRef seed, DoubleDBIDList newneighbors, int clusterid, WritableIntegerDataStore clusterids, ArrayModifiableDBIDs activeSet)	Process a single core point.
private void	DBSCAN.Instance.processNeighbors(DoubleDBIDList neighbors, ModifiableDBIDs currentCluster, ArrayModifiableDBIDs seeds)	Process a single core point.

Uses of DoubleDBIDList in elki.clustering.dbscan.predicates

Methods in elki.clustering.dbscan.predicates that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	EpsilonNeighborPredicate.Instance.getNeighbors(DBIDRef reference)
DoubleDBIDList	SimilarityNeighborPredicate.Instance.getNeighbors(DBIDRef reference)

Methods in elki.clustering.dbscan.predicates that return types with arguments of type DoubleDBIDList

Modifier and Type	Method	Description
SimpleTypeInformation<DoubleDBIDList>	EpsilonNeighborPredicate.getOutputType()
SimpleTypeInformation<DoubleDBIDList>	SimilarityNeighborPredicate.getOutputType()

Methods in elki.clustering.dbscan.predicates with parameters of type DoubleDBIDList

Modifier and Type	Method	Description
protected abstract M	AbstractRangeQueryNeighborPredicate.computeLocalModel(DBIDRef id, DoubleDBIDList neighbors, Relation<? extends O> relation)	Method to compute the actual data model.
protected COPACNeighborPredicate.COPACModel	COPACNeighborPredicate.computeLocalModel(DBIDRef id, DoubleDBIDList knnneighbors, Relation<? extends NumberVector> relation)	COPAC model computation
protected PreDeConNeighborPredicate.PreDeConModel	FourCNeighborPredicate.computeLocalModel(DBIDRef id, DoubleDBIDList neighbors, Relation<? extends NumberVector> relation)
protected PreDeConNeighborPredicate.PreDeConModel	PreDeConNeighborPredicate.computeLocalModel(DBIDRef id, DoubleDBIDList neighbors, Relation<? extends NumberVector> relation)
DBIDIter	EpsilonNeighborPredicate.Instance.iterDBIDs(DoubleDBIDList neighbors)
DBIDIter	SimilarityNeighborPredicate.Instance.iterDBIDs(DoubleDBIDList neighbors)

Uses of DoubleDBIDList in elki.data.type

Fields in elki.data.type with type parameters of type DoubleDBIDList

Modifier and Type	Field	Description
static SimpleTypeInformation<DoubleDBIDList>	TypeUtil.NEIGHBORLIST	A list of neighbors.

Uses of DoubleDBIDList in elki.database.ids

Subinterfaces of DoubleDBIDList in elki.database.ids

Modifier and Type	Interface	Description
interface	KNNList	Interface for kNN results.
interface	ModifiableDoubleDBIDList	Modifiable API for Distance-DBID results

Methods in elki.database.ids that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	DoubleDBIDList.slice(int begin, int end)	Get a subset list.

Uses of DoubleDBIDList in elki.database.ids.integer

Subinterfaces of DoubleDBIDList in elki.database.ids.integer

Modifier and Type	Interface	Description
(package private) interface	DoubleIntegerDBIDList	Interface to store double distance, integer DBID results.

Classes in elki.database.ids.integer that implement DoubleDBIDList

Modifier and Type	Class	Description
(package private) class	DoubleIntegerDBIDArrayList	Class to store double distance, integer DBID results.
(package private) class	DoubleIntegerDBIDKNNList	kNN list, but without automatic sorting.
class	DoubleIntegerDBIDSubList	Sublist of an existing result to contain only some of the elements.
class	IntegerDBIDKNNSubList	Sublist of an existing result to contain only the first k elements.

Uses of DoubleDBIDList in elki.database.query.range

Methods in elki.database.query.range that return DoubleDBIDList

Modifier and Type	Method	Description
default DoubleDBIDList	RangeSearcher.getRange(O query, double range)	Get the neighbors for a particular object in a given query range.

Uses of DoubleDBIDList in elki.database.query.rknn

Methods in elki.database.query.rknn that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	LinearScanRKNNByDBID.getRKNN(DBIDRef id, int k)
DoubleDBIDList	LinearScanRKNNByObject.getRKNN(O obj, int k)
DoubleDBIDList	PreprocessorRKNNQuery.getRKNN(DBIDRef id, int k)
DoubleDBIDList	RKNNSearcher.getRKNN(O query, int k)	Get the reverse k nearest neighbors for a particular object.
DoubleDBIDList	WrappedRKNNDBIDByLookup.getRKNN(DBIDRef id, int k)

Uses of DoubleDBIDList in elki.evaluation.clustering

Methods in elki.evaluation.clustering with parameters of type DoubleDBIDList

Modifier and Type	Method	Description
static double	EvaluateClustering.evaluateRanking(ScoreEvaluation eval, Cluster<?> clus, DoubleDBIDList ranking)	Evaluate given a cluster (of positive elements) and a scoring list.

Uses of DoubleDBIDList in elki.evaluation.scores

Methods in elki.evaluation.scores with parameters of type DoubleDBIDList

Modifier and Type	Method	Description
default double	ScoreEvaluation.evaluate(DBIDs ids, DoubleDBIDList nei)	Evaluate given a list of positives and a scoring.

Uses of DoubleDBIDList in elki.index.preprocessed.knn

Methods in elki.index.preprocessed.knn that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	MaterializeKNNAndRKNNPreprocessor.getRKNN(DBIDRef id)	Returns the materialized RkNNs of the specified id.

Uses of DoubleDBIDList in elki.index.projected

Methods in elki.index.projected that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	ProjectedIndex.ProjectedRKNNByDBID.getRKNN(DBIDRef id, int k)
DoubleDBIDList	ProjectedIndex.ProjectedRKNNByObject.getRKNN(O obj, int k)

Uses of DoubleDBIDList in elki.index.tree.metrical.covertree

Methods in elki.index.tree.metrical.covertree with parameters of type DoubleDBIDList

Modifier and Type	Method	Description
protected double	AbstractCoverTree.maxDistance(DoubleDBIDList elems)	Find maximum in a list via scanning.

Constructors in elki.index.tree.metrical.covertree with parameters of type DoubleDBIDList

Constructor	Description
Node(DBIDRef r, double maxDist, double parentDist, DoubleDBIDList singletons)	Constructor for leaf node.
Node(DBIDRef r, double maxDist, DoubleDBIDList singletons)	Constructor for leaf node.

Uses of DoubleDBIDList in elki.index.tree.metrical.mtreevariants.mktrees

Methods in elki.index.tree.metrical.mtreevariants.mktrees that return DoubleDBIDList

Modifier and Type	Method	Description
abstract DoubleDBIDList	AbstractMkTree.reverseKNNQuery(DBIDRef id, int k)	Performs a reverse k-nearest neighbor query for the given object ID.

Uses of DoubleDBIDList in elki.index.tree.metrical.mtreevariants.mktrees.mkapp

Methods in elki.index.tree.metrical.mtreevariants.mktrees.mkapp that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	MkAppTree.reverseKNNQuery(DBIDRef id, int k)	Performs a reverse k-nearest neighbor query for the given object ID.

Uses of DoubleDBIDList in elki.index.tree.metrical.mtreevariants.mktrees.mkcop

Methods in elki.index.tree.metrical.mtreevariants.mktrees.mkcop that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	MkCoPTree.reverseKNNQuery(DBIDRef id, int k)	Performs a reverse k-nearest neighbor query for the given object ID.

Uses of DoubleDBIDList in elki.index.tree.metrical.mtreevariants.mktrees.mkmax

Methods in elki.index.tree.metrical.mtreevariants.mktrees.mkmax that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	MkMaxTree.reverseKNNQuery(DBIDRef id, int k)	Performs a reverse k-nearest neighbor query for the given object ID.

Uses of DoubleDBIDList in elki.index.tree.metrical.mtreevariants.mktrees.mktab

Methods in elki.index.tree.metrical.mtreevariants.mktrees.mktab that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	MkTabTree.reverseKNNQuery(DBIDRef id, int k)

Uses of DoubleDBIDList in elki.index.tree.metrical.mtreevariants.query

Methods in elki.index.tree.metrical.mtreevariants.query that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	MkTreeRKNNQuery.getRKNN(DBIDRef id, int k)

Uses of DoubleDBIDList in elki.index.tree.spatial.rstarvariants.rdknn

Methods in elki.index.tree.spatial.rstarvariants.rdknn that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList	RdKNNTree.reverseKNNQuery(DBID oid, int k, SpatialPrimitiveDistance<? super O> distance)

Uses of DoubleDBIDList in elki.math.linearalgebra.pca

Methods in elki.math.linearalgebra.pca with parameters of type DoubleDBIDList

Modifier and Type	Method	Description
private void	AutotuningPCA.assertSortedByDistance(DoubleDBIDList results)	Ensure that the results are sorted by distance.
PCAResult	AutotuningPCA.processQueryResult(DoubleDBIDList results, Relation<? extends NumberVector> database)
PCAResult	PCARunner.processQueryResult(DoubleDBIDList results, Relation<? extends NumberVector> database)	Run PCA on a QueryResult Collection.
default double[][]	CovarianceMatrixBuilder.processQueryResults(DoubleDBIDList results, Relation<? extends NumberVector> database)	Compute covariance matrix for a QueryResult Collection.
default double[][]	CovarianceMatrixBuilder.processQueryResults(DoubleDBIDList results, Relation<? extends NumberVector> database, int k)	Compute covariance matrix for a QueryResult collection.
double[][]	WeightedCovarianceMatrixBuilder.processQueryResults(DoubleDBIDList results, Relation<? extends NumberVector> database, int k)	Compute Covariance Matrix for a QueryResult Collection.

Uses of DoubleDBIDList in elki.outlier.distance

Methods in elki.outlier.distance that return DoubleDBIDList

Modifier and Type	Method	Description
protected DoubleDBIDList	ReferenceBasedOutlierDetection.computeDistanceVector(NumberVector refPoint, Relation<? extends NumberVector> database, PrimitiveDistanceQuery<? super NumberVector> distFunc)	Computes for each object the distance to one reference point.

Methods in elki.outlier.distance with parameters of type DoubleDBIDList

Modifier and Type	Method	Description
protected double	ReferenceBasedOutlierDetection.computeDensity(DoubleDBIDList referenceDists, DoubleDBIDListIter iter, int index)	Computes the density of an object.
protected void	ReferenceBasedOutlierDetection.updateDensities(WritableDoubleDataStore rbod_score, DoubleDBIDList referenceDists)	Update the density estimates for each object.

Uses of DoubleDBIDList in elki.outlier.subspace

Methods in elki.outlier.subspace that return DoubleDBIDList

Modifier and Type	Method	Description
private DoubleDBIDList	OUTRES.initialRange(DBIDRef obj, DBIDs cands, PrimitiveDistance<? super NumberVector> df, double eps, OUTRES.KernelDensityEstimator kernel, ModifiableDoubleDBIDList n)	Initial range query.
private DoubleDBIDList	OUTRES.subsetNeighborhoodQuery(DoubleDBIDList neighc, DBIDRef dbid, PrimitiveDistance<? super NumberVector> df, double adjustedEps, OUTRES.KernelDensityEstimator kernel, ModifiableDoubleDBIDList n)	Refine neighbors within a subset.

Methods in elki.outlier.subspace with parameters of type DoubleDBIDList

Modifier and Type	Method	Description
protected boolean	OUTRES.relevantSubspace(long[] subspace, DoubleDBIDList neigh, OUTRES.KernelDensityEstimator kernel)	Subspace relevance test.
private DoubleDBIDList	OUTRES.subsetNeighborhoodQuery(DoubleDBIDList neighc, DBIDRef dbid, PrimitiveDistance<? super NumberVector> df, double adjustedEps, OUTRES.KernelDensityEstimator kernel, ModifiableDoubleDBIDList n)	Refine neighbors within a subset.
protected double	OUTRES.KernelDensityEstimator.subspaceDensity(long[] subspace, DoubleDBIDList neighbors)	Compute density in the given subspace.

Uses of DoubleDBIDList in elki.visualization.projections

Methods in elki.visualization.projections that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList[]	SilhouetteProjection.getSilhouetteValues()	Get the silhouette values

Uses of DoubleDBIDList in elki.visualization.projector

Fields in elki.visualization.projector declared as DoubleDBIDList

Modifier and Type	Field	Description
private DoubleDBIDList[]	SilhouettePlotProjector.values	Silhouette values

Methods in elki.visualization.projector that return DoubleDBIDList

Modifier and Type	Method	Description
DoubleDBIDList[]	SilhouettePlotProjector.getValues()	Get the silhouette values
private static DoubleDBIDList[]	SilhouettePlotProjector.sortSilhouette(Clustering<?> c, DoubleRelation dds)	Sort the silhouettes for visualization.

Uses of DoubleDBIDList in elki.visualization.silhouette

Fields in elki.visualization.silhouette declared as DoubleDBIDList

Modifier and Type	Field	Description
(package private) DoubleDBIDList[]	SilhouettePlot.silhouettes	The silhouette values.

Methods in elki.visualization.silhouette with parameters of type DoubleDBIDList

Modifier and Type	Method	Description
protected LinearScale	SilhouettePlot.computeScale(DoubleDBIDList[] silhouettes)	Compute the scale (value range)
static SilhouettePlot	SilhouettePlot.plotForSilhouetteValues(DoubleDBIDList[] silhouettes, VisualizerContext context)	Static method to find a silhouette plot for a result, or to create a new one using the given context.

Constructors in elki.visualization.silhouette with parameters of type DoubleDBIDList

Constructor	Description
SilhouettePlot(DoubleDBIDList[] silhouettes, StylingPolicy colors)	Constructor, with automatic distance adapter detection.